Original paper
SpatialDE: identification of spatially variable genes
Abstract
Technological advances have made it possible to measure spatially resolved gene expression at high throughput. However, methods to analyze these data are not established. Here we describe SpatialDE, a statistical test to identify genes with spatial patterns of expression variation from multiplexed imaging or spatial RNA-sequencing data. SpatialDE also implements 'automatic expression histology', a spatial gene-clustering approach that enables...
Paper Details
Title
SpatialDE: identification of spatially variable genes
Published Date
Mar 19, 2018
Journal
Volume
15
Issue
5
Pages
343 - 346
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Notes
History