SNPs detection by eBWT positional clustering

Sequencing technologies keep on turning cheaper and faster, thus putting a growing pressure for data structures designed to efficiently store raw data, and possibly perform analysis therein. In this view, there is a growing interest in alignment-free and reference-free variants calling methods that only make use of (suitably indexed) raw reads data.We develop the positional clustering theory that (i) describes how the extended Burrows-Wheeler...