Original paper

De Novo Repeat Classification and Fragment Assembly

Volume: 14, Issue: 9, Pages: 1786 - 1796
Published: Sep 1, 2004
Abstract
Repetitive sequences make up a significant fraction of almost any genome, and an important and still open question in bioinformatics is how to represent all repeats in DNA sequences. We propose a new approach to repeat classification that represents all repeats in a genome as a mosaic of sub-repeats. Our key algorithmic idea also leads to new approaches to multiple alignment and fragment assembly. In particular, we show that our FragmentGluer...
Paper Details
Title
De Novo Repeat Classification and Fragment Assembly
Published Date
Sep 1, 2004
Volume
14
Issue
9
Pages
1786 - 1796
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