Reconstructing signaling pathways using regular language constrained paths
Abstract
Motivation High-quality curation of the proteins and interactions in signaling pathways is slow and painstaking. As a result, many experimentally detected interactions are not annotated to any pathways. A natural question that arises is whether or not it is possible to automatically leverage existing pathway annotations to identify new interactions for inclusion in a given pathway. Results We present RegLinker, an algorithm that achieves this...
Paper Details
Title
Reconstructing signaling pathways using regular language constrained paths
Published Date
Jul 1, 2019
Journal
Volume
35
Issue
14
Pages
i624 - i633
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