Genesis and Gappa: Processing, Analyzing and Visualizing Phylogenetic (Placement) Data
Abstract
The ever increasing amount of genomic and meta-genomic sequence data has transformed biology into a data-driven and compute-intensive discipline. Hence, there is a need for efficient algorithms and scalable implementations thereof for analysing such data. We present genesis, a library for working with phylogenetic data, and gappa, an accompanying command line tool for conducting typical analyses on such data. While our tools primarily target...
Paper Details
Title
Genesis and Gappa: Processing, Analyzing and Visualizing Phylogenetic (Placement) Data
Published Date
May 28, 2019
Journal
Pages
647958
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