VHost-Classifier: virus-host classification using natural language processing
Abstract
Motivation When analyzing viral metagenomic sequences, it is often desired to filter the results of a BLAST analysis by the host species of the virus. VHost-Classifier automates this procedure using a natural language processing algorithm written in Python 3, which takes a list of taxonomic identifiers (taxids) returned from a BLAST query using viral sequences as input. The taxid output is binned by the evolutionary lineage of their host, based...
Paper Details
Title
VHost-Classifier: virus-host classification using natural language processing
Published Date
Mar 1, 2019
Journal
Volume
35
Issue
19
Pages
3867 - 3869
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