Author Correction: Rhizosphere microbiome structure alters to enable wilt resistance in tomato

Published on Nov 1, 2018in Nature Biotechnology
· DOI :10.1038/nbt1118-1117
Min Jung Kwak8
Estimated H-index: 8
Hyun Gi Kong8
Estimated H-index: 8
+ 15 AuthorsJihyun F. Kim35
Estimated H-index: 35
Author Correction: Rhizosphere microbiome structure alters to enable wilt resistance in tomato
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Rehmannia glutinosa, a perennial medicinal plant, suffers from severe replant disease under consecutive monoculture. The rhizosphere microbiome is vital for soil suppressiveness to diseases and for plant health. Moreover, N-acyl homoserine lactone (AHL)-mediated quorum sensing (QS) regulates diverse behavior in rhizosphere-inhabiting and plant pathogenic bacteria. The dynamics of short-chain AHL-mediated QS bacteria driven by consecutive monoculture and its relationships with R. glutinosa replan...
#1Ying Zhang (Hainan Normal University)
#2Anna Hu (Hainan Normal University)
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BACKGROUND: Ralstonia solanacearum is one of the most notorious soil-borne phytopathogens. It causes a severe wilt disease with deadly effects on many economically important crops. The microbita of disease-suppressive soils are thought that they can contribute to the disease resistance of crop plants, thus, evaluation of the microbial community and their interaction characteristics between suppressive soil (SS) and conducive soil (CS) will help to understand resistance mechanism. To do this, the...
#1Fuki Okutani (Kyoto University)H-Index: 1
#2Shoichiro Hamamoto (UTokyo: University of Tokyo)H-Index: 13
Last. Akifumi Sugiyama (Kyoto University)H-Index: 21
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Plant roots nurture a wide variety of microbes via exudation of metabolites, shaping the rhizosphere's microbial community. Despite the importance of plant specialized metabolites in the assemblage and function of microbial communities in the rhizosphere, little is known of how far the effects of these metabolites extend through the soil. We employed a fluid model to simulate the spatiotemporal distribution of daidzein, an isoflavone secreted from soybean roots, and validated using soybeans grow...
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#2Zhongyou MaH-Index: 6
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Soil microbial community changes imposed by the cumulative effects of root-secreted phenolic acids (PAs) promote soil-borne pathogen establishment and invasion under monoculture systems, but the disease-suppressive soil often exhibits less soil-borne pathogens compared with the conducive soil. So far, it remains poorly understood whether soil disease suppressiveness is associated with the alleviated negative effects of PAs, involving microbial degradation. Here, the long-term monoculture particu...
#1Adam OssowickiH-Index: 3
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In disease-suppressive soils, microbiota protect plants from root infections. Bacterial members of this microbiota have been shown to produce specific molecules that mediate this phenotype. To date...
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Endophytic microorganisms absorb nutrients and prevent pathogen damage, supporting healthy plant growth. However, the relationship between endophytic bacteria and berberine synthesis in the medicinal plant Coptis teeta Wall. remains unclear. Herein, we explored the community composition of endophytic bacteria related to berberine in roots, stems, and leaves of wild-type and cultivated C. teeta. Endophytic bacterial communities were analyzed by 16S rRNA sequencing, and berberine content in roots ...
#1Zengqiang LiH-Index: 3
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Aims Wheat (Triticum aestivum L.) cultivars vary in their resistance to Fusarium head blight (FHB), while it is poorly understood how different cultivars influence FHB-causing Fusarium graminearum abundance in rhizosphere soil.
#1Víctor J. Carrión (LEI: Leiden University)H-Index: 11
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Microorganisms living inside plants can promote plant growth and health, but their genomic and functional diversity remain largely elusive. Here, metagenomics and network inference show that fungal infection of plant roots enriched for Chitinophagaceae and Flavobacteriaceae in the root endosphere and for chitinase genes and various unknown biosynthetic gene clusters encoding the production of nonribosomal peptide synthetases (NRPSs) and polyketide synthases (PKSs). After strain-level genome reco...
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#1Tian-hao Liu (JNU: Jinan University)
#2Xiao-mei Zhang (Yunnan University of Traditional Chinese Medicine)H-Index: 2
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Abstract Plant endophytic microorganisms absorb nutrients and prevent pathogen damage, supporting healthy plant growth. However, relationships between endophytic bacteria of the medicinal plant Coptis teeta Wall. and berberine production remain unclear. Herein, we explored the microbial composition of wild-type (WT) and cultivated Coptis teeta Wall. root, stem and leaf, and endophytic bacteria related to berberine. Microbial characteristics of were analyzed by 16S rDNA sequencing, and berberine ...
#1R. Alegria Terrazas (Dund.: University of Dundee)H-Index: 1
#2L. Pietrangelo (UNIMOL: University of Molise)H-Index: 1
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Abstract Background Since the dawn of agriculture, human selection on plants has progressively differentiated input-demanding productive crops from their wild progenitors thriving in marginal areas. Barley (Hordeum vulgare), the fourth most cultivated cereal globally, is a prime example of this process. We previously demonstrated that wild and domesticated barley genotypes host distinct microbial communities in their rhizosphere. Here we tested the hypothesis that microbiota diversification is m...
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