A phylogenomic framework, evolutionary timeline and genomic resources for comparative studies of decapod crustaceans

Published on Apr 24, 2019

· DOI :10.1098/rspb.2019.0079

Joanna M. Wolfe8

Estimated H-index: 8

(MIT: Massachusetts Institute of Technology), Jesse W. Breinholt17

Estimated H-index: 17

(Florida Museum of Natural History)+ 5 AuthorsHeather D. Bracken-Grissom12

Estimated H-index: 12

(FIU: Florida International University)

Abstract

Comprising over 15 000 living species, decapods (crabs, shrimp and lobsters) are the most instantly recognizable crustaceans, representing a considerable global food source. Although decapod system...

References (71)
Citations (7)

References71

Newest

Freshwater transitions and symbioses shaped the evolution and extant diversity of caridean shrimps

#1Katie E. Davis (Ebor: University of York)H-Index: 10

#2Sammy De Grave (University of Oxford)H-Index: 18

Last.Matthew A. Wills (University of Bath)H-Index: 25

view all 4 authors...

7 Citations Source

Anchored phylogenomics unravels the evolution of spider flies (Diptera, Acroceridae) and reveals discordance between nucleotides and amino acids

Nov 1, 2018·Molecular Phylogenetics and Evolution3.99

#1Jessica P. Gillung (UC Davis: University of California, Davis)H-Index: 5

#2Shaun L. WintertonH-Index: 20

Last.Brian M. Wiegmann (NCSU: North Carolina State University)H-Index: 33

view all 13 authors...

7 Citations Source

ORDER within the chaos: Insights into phylogenetic relationships within the Anomura (Crustacea: Decapoda) from mitochondrial sequences and gene order rearrangements

Oct 1, 2018·Molecular Phylogenetics and Evolution3.99

#1Mun Hua Tan (Deakin University)H-Index: 11

#2Han Ming Gan (Monash University Malaysia Campus)H-Index: 17

Last.Christopher M. Austin (Monash University Malaysia Campus)H-Index: 29

view all 8 authors...

15 Citations Source

Tetraconatan phylogeny with special focus on Malacostraca and Branchiopoda: highlighting the strength of taxon-specific matrices in phylogenomics

#1Martin Schwentner (Harvard University)H-Index: 11

#2Stefan RichterH-Index: 28

Last.Gonzalo Giribet (Harvard University)H-Index: 63

view all 4 authors...

12 Citations Source

Morphology and paleoecology of the oldest lobster-like decapod, Palaeopalaemon newberryi Whitfield, 1880 (Decapoda: Malacostraca)

May 17, 2018·Journal of Crustacean Biology1.07

#1Wade T. Jones (KSU: Kent State University)H-Index: 5

#2Rodney M. Feldmann (KSU: Kent State University)H-Index: 2

Last.Jessica N. Tashman (KSU: Kent State University)H-Index: 2

view all 7 authors...

4 Citations Source

So many genes, so little time: A practical approach to divergence-time estimation in the genomic era

May 17, 2018·PLOS ONE2.78

#1Stephen A. SmithH-Index: 55

#2Joseph W. BrownH-Index: 22

Last.Joseph F. WalkerH-Index: 11

view all 3 authors...

13 Citations Source

The Past Sure is Tense: On Interpreting Phylogenetic Divergence Time Estimates

Mar 1, 2018·Systematic Biology10.27

#1Joseph W. Brown (UM: University of Michigan)H-Index: 22

#2Stephen A. Smith (UM: University of Michigan)H-Index: 55

22 Citations Source

Investigating the genetic and epigenetic basis of big biological questions with the parthenogenetic marbled crayfish: A review and perspectives

Mar 1, 2018·Journal of Biosciences1.82

#1Günter Vogt (Heidelberg University)H-Index: 20

10 Citations Source

Resolving Rapid Radiations within Angiosperm Families Using Anchored Phylogenomics

Jan 1, 2018·Systematic Biology10.27

#1Étienne Léveillé-Bourret (U of O: University of Ottawa)H-Index: 4

#2Julian R. Starr (U of O: University of Ottawa)H-Index: 15

Last.Alan R. Lemmon (FSU: Florida State University)H-Index: 30

view all 5 authors...

34 Citations Source

Resolving relationships among the megadiverse butterflies and moths with a novel pipeline for anchored phylogenomics

Jan 1, 2018·Systematic Biology10.27

#1Jesse W. Breinholt (Florida Museum of Natural History)H-Index: 17

#2Chandra Earl (Florida Museum of Natural History)H-Index: 3

Last.Akito Y. Kawahara (Florida Museum of Natural History)H-Index: 22

view all 6 authors...

39 Citations Source

1 2 3 4 5 6 7 8

Cited By7

Newest

Comparative mitogenomics of the Decapoda reveals evolutionary heterogeneity in architecture and composition

Dec 1, 2019·Scientific Reports4.01

#1Mun Hua Tan (Deakin University)H-Index: 11

#2Han Ming GanH-Index: 17

Last.Christopher M. AustinH-Index: 29

view all 7 authors...

Source

Evolution of crab eye structures and the utility of ommatidia morphology in resolving phylogeny

Oct 7, 2019·bioRxiv

#1Javier Luque (Yale University)H-Index: 10

#2W. Ted Allison (U of A: University of Alberta)H-Index: 16

Last.Joanna M. Wolfe (Harvard University)H-Index: 8

view all 7 authors...

Source

The oldest fossil axiid (Decapoda: Pleocyemata: Axiidea), from the Late Devonian (Famennian) Chagrin Shale Member of the Ohio Shale, USA

Sep 9, 2019·Journal of Crustacean Biology1.07

#1Rodney M. Feldmann (KSU: Kent State University)H-Index: 37

#2Carrie E. Schweitzer (Kent State University at Stark)H-Index: 31

Source

Mushroom bodies in Reptantia reflect a major transition in crustacean brain evolution

Aug 27, 2019·The Journal of Comparative Neurology3.24

#1Nicholas J. Strausfeld (UA: University of Arizona)H-Index: 2

#2Marcel E. Sayre (Lund University)H-Index: 2

Source

Six-state amino acid recoding is not an effective strategy to offset the effects of compositional heterogeneity and saturation in phylogenetic analyses

Aug 8, 2019·bioRxiv

#1Alexandra M. Hernandez (UF: University of Florida)H-Index: 1

#2Joseph F. Ryan (UF: University of Florida)H-Index: 23

1 Citations Source

The late blooming amphipods: global change promoted post-Jurassic ecological radiation despite Palaeozoic origin

Jun 18, 2019·bioRxiv

#1Denis Copilaş-CiocianuH-Index: 4

#2Špela Borko (University of Ljubljana)H-Index: 1

Last.Cene Fišer (University of Ljubljana)H-Index: 18

view all 3 authors...

1 Citations Source