SCRAM: a pipeline for fast index-free small RNA read alignment and visualization
Abstract
Small RNAs play key roles in gene regulation, defense against viral pathogens and maintenance of genome stability, though many aspects of their biogenesis and function remain to be elucidated. SCRAM (Small Complementary RNA Mapper) is a novel, simple-to-use short read aligner and visualization suite that enhances exploration of small RNA datasets.The SCRAM pipeline is implemented in Go and Python, and is freely available under MIT license....
Paper Details
Title
SCRAM: a pipeline for fast index-free small RNA read alignment and visualization
Published Date
Mar 15, 2018
Journal
Volume
34
Issue
15
Pages
2670 - 2672
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