RNAscClust: clustering RNA sequences using structure conservation and graph based motifs

Volume: 33, Issue: 14, Pages: 2089 - 2096
Published: Feb 27, 2017
Abstract
Clustering RNA sequences with common secondary structure is an essential step towards studying RNA function. Whereas structural RNA alignment strategies typically identify common structure for orthologous structured RNAs, clustering seeks to group paralogous RNAs based on structural similarities. However, existing approaches for clustering paralogous RNAs, do not take the compensatory base pair changes obtained from structure conservation in...
Paper Details
Title
RNAscClust: clustering RNA sequences using structure conservation and graph based motifs
Published Date
Feb 27, 2017
Volume
33
Issue
14
Pages
2089 - 2096
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