Crumple: An Efficient Tool to Explore Thoroughly the RNA Folding Landscape
Abstract
The folding landscape for an RNA sequence contains many diverse structures and motifs, which are often sampled rather than completely explored. Today's supercomputers make the complete enumeration of all possible folds for an RNA and a detailed description of the RNA folding landscape a more feasible task. This chapter provides protocols for using the Crumple folding algorithm, an efficient tool to generate all possible non-pseudoknotted folds...
Paper Details
Title
Crumple: An Efficient Tool to Explore Thoroughly the RNA Folding Landscape
Published Date
Jan 1, 2016
Journal
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