Bayesian Selection of Nucleotide Substitution Models and Their Site Assignments
Abstract
Probabilistic inference of a phylogenetic tree from molecular sequence data is predicated on a substitution model describing the relative rates of change between character states along the tree for each site in the multiple sequence alignment. Commonly, one assumes that the substitution model is homogeneous across sites within large partitions of the alignment, assigns these partitions a priori, and then fixes their underlying substitution model...
Paper Details
Title
Bayesian Selection of Nucleotide Substitution Models and Their Site Assignments
Published Date
Dec 11, 2012
Volume
30
Issue
3
Pages
669 - 688
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