SpeedSeq: ultra-fast personal genome analysis and interpretation
Abstract
SpeedSeq is an open-source genome analysis platform that accomplishes alignment, variant detection and functional annotation of a 50× human genome in 13 h on a low-cost server and alleviates a bioinformatics bottleneck that typically demands weeks of computation with extensive hands-on expert involvement. SpeedSeq offers performance competitive with or superior to current methods for detecting germline and somatic single-nucleotide variants,...
Paper Details
Title
SpeedSeq: ultra-fast personal genome analysis and interpretation
Published Date
Aug 10, 2015
Journal
Volume
12
Issue
10
Pages
966 - 968
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Notes
History