Original paper
Automated De Novo Identification of Repeat Sequence Families in Sequenced Genomes
Abstract
Repetitive sequences make up a major part of eukaryotic genomes. We have developed an approach for the de novo identification and classification of repeat sequence families that is based on extensions to the usual approach of single linkage clustering of local pairwise alignments between genomic sequences. Our extensions use multiple alignment information to define the boundaries of individual copies of the repeats and to distinguish homologous...
Paper Details
Title
Automated De Novo Identification of Repeat Sequence Families in Sequenced Genomes
Published Date
Jul 19, 2002
Journal
Volume
12
Issue
8
Pages
1269 - 1276
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Notes
History