WindowMasker: window-based masker for sequenced genomes
Abstract
Motivation: Matches to repetitive sequences are usually undesirable in the output of DNA database searches. Repetitive sequences need not be matched to a query, if they can be masked in the database. RepeatMasker/Maskeraid (RM), currently the most widely used software for DNA sequence masking, is slow and requires a library of repetitive template sequences, such as a manually curated RepBase library, that may not exist for newly sequenced...
Paper Details
Title
WindowMasker: window-based masker for sequenced genomes
Published Date
Nov 15, 2005
Journal
Volume
22
Issue
2
Pages
134 - 141
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