A general species delimitation method with applications to phylogenetic placements
Abstract
Motivation: Sequence-based methods to delimit species are central to DNA taxonomy, microbial community surveys and DNA metabarcoding studies. Current approaches either rely on simple sequence similarity thresholds (OTU-picking) or on complex and compute-intensive evolutionary models. The OTU-picking methods scale well on large datasets, but the results are highly sensitive to the similarity threshold. Coalescent-based species delimitation...
Paper Details
Title
A general species delimitation method with applications to phylogenetic placements
Published Date
Nov 15, 2013
Journal
Volume
29
Issue
22
Pages
2869 - 2876
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