UPARSE: highly accurate OTU sequences from microbial amplicon reads
Abstract
Amplified marker-gene sequences can be used to understand microbial community structure, but they suffer from a high level of sequencing and amplification artifacts. The UPARSE pipeline reports operational taxonomic unit (OTU) sequences with ≤1% incorrect bases in artificial microbial community tests, compared with >3% incorrect bases commonly reported by other methods. The improved accuracy results in far fewer OTUs, consistently closer to the...
Paper Details
Title
UPARSE: highly accurate OTU sequences from microbial amplicon reads
Published Date
Aug 18, 2013
Journal
Volume
10
Issue
10
Pages
996 - 998
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