De novo repeat classification and fragment assembly
Published: Jan 1, 2004
Abstract
Repetitive sequences make up a significant fraction of almost any genome and an important and still open question in bioinformatics is how to represent all repeats in DNA sequences. We propose a radically new approach to repeat classification that is motivated by the fundamental topological notion of quotient spaces. A torus or Klein bottle are examples of quotient spaces that can be obtained from a square by gluing some points. Our new repeat...
Paper Details
Title
De novo repeat classification and fragment assembly
Published Date
Jan 1, 2004
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