MINING APPROXIMATE REPEATING PATTERNS FROM SEQUENCE DATA WITH GAP CONSTRAINTS
Abstract
The rapid increase of available DNA, protein, and other biological sequences has made the problem of discovering meaningful patterns from sequences an important task for Bioinformatics research. Among all types of patterns defined in the literature, the most challenging one is to find repeating patterns with gap constraints. In this article, we identify a new research problem for mining approximate repeating patterns (ARPs) with gap constraints,...
Paper Details
Title
MINING APPROXIMATE REPEATING PATTERNS FROM SEQUENCE DATA WITH GAP CONSTRAINTS
Published Date
Aug 1, 2011
Journal
Volume
27
Issue
3
Pages
336 - 362
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